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LncRNA-target data from low-throughput experiments, such as RT-qPCR, western blot, luciferase reporter assays, immunoprecipitation assays, and RNA pull down assays.

lncRNA_target_from_low_throughput_experiments.xlsx

LncRNA-target data from lncRNA knockdown or overexpression experiments followed by microarray or RNA-seq:

lncRNA-target associations: lncRNA_target_from_high_throughput_experiments.txt

Species LncRNA experiment LncRNA name Tissue Cell line Disease state GSE ID Reference Expression value Differential genes
Human Knockdown TINCR Organotypic human epidermis NA Normal GSE40122 Kretz M, Siprashvili Z, Chu C, Webster DE et al. Control of somatic tissue differentiation by the long non-coding RNA TINCR. Nature 2013 Jan 10;493(7431):231-5. Download Download
Human Knockdown BANCR Skin Colo829 Melanoma GSE37132 Flockhart RJ, Webster DE, Qu K, Mascarenhas N et al. BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration. Genome Res 2012 Jun;22(6):1006-14. Download Download
Human Knockdown TUG1 Foot NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown TUG1 Lung NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown lincFOXF1 Lung NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown lincIRX5 Foot NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown lincMTX2 Foot NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown lincTNS1 Lung NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown lincZFP161 Lung NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown lincSTXBP5 Foot NA Normal GSE16226 Khalil AM, Guttman M, Huarte M, Garber M et al. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 2009 Jul 14;106(28):11667-72. Download Download
Human Knockdown ANCR NA Keratinocytes Normal GSE34528 Kretz M, Webster DE, Flockhart RJ, Lee CS et al. Suppression of progenitor differentiation requires the long noncoding RNA ANCR. Genes Dev 2012 Feb 15;26(4):338-43. Download Download
Mouse Knockdown AK005218 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK016444 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK017076 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK040027 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK040954 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK045415 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK136742 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Mouse Knockdown AK161599 adipocyte C57BL/6 Normal GSE29897 Sun L, Goff LA, Trapnell C, Alexander R et al. Long noncoding RNAs regulate adipogenesis. Proc Natl Acad Sci U S A 2013 Feb 26;110(9):3387-92. Download Download
Human Knockdown MALAT1 Lung WI38 Normal GSE43830 awaiting publication Download Download
Mouse Knockdown Fendrr Heart ventricle NA Normal GSE43078 Grote P, Wittler L, Hendrix D, Koch F et al. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Dev Cell 2013 Jan 28;24(2):206-14. Download Download
Human Knockdown DA125942 bone marrow NA Normal GSE39896 Maass PG, Rump A, Schulz H, Stricker S et al. A misplaced lncRNA causes brachydactyly in humans. J Clin Invest 2012 Nov 1;122(11):3990-4002. Download Download
Human Overexpression DA125942 bone marrow NA Normal GSE39896 Maass PG, Rump A, Schulz H, Stricker S et al. A misplaced lncRNA causes brachydactyly in humans. J Clin Invest 2012 Nov 1;122(11):3990-4002. Download Download
Human Knockdown BEHOT bone marrow SH-SY5Y Neuroblastoma GSE40680 awaiting publication Download Download
Human Knockdown NEAT1 Cervix HeLa Cervical cancer GSE45158 awaiting publication Download Download
Mouse Knockdown linc1230 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1239 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1245 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1259 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1261 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1262 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1270 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1274 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1290 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1293 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1307 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1312 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1313 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1315 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1316 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1328 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1331 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1335 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1347 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1349 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1354 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1361 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1366 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1368 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1369 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1382 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1385 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1386 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1388 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1389 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1390 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1391 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1400 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1410 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1411 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1412 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1413 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1418 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1419 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1421 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1422 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1425 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1427 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1428 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1434 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1435 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1450 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1454 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1456 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1457 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1463 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1468 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1470 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1471 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1473 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1483 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1517 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1524 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1540 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1543 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1552 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1555 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1557 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1558 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1559 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1572 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1581 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1582 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1588 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1589 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1592 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1595 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1599 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1601 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1602 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1603 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1604 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1608 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1609 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1610 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1611 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1612 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1613 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1614 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1615 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1617 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1618 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1622 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1623 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1624 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1626 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1629 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1630 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1631 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1632 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1633 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1634 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Mouse Knockdown linc1635 Embryo V6.5 Normal GSE30245 Guttman M, Donaghey J, Carey BW, Garber M et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature 2011 Aug 28;477(7364):295-300. Download Download
Human Knockdown lnrCXCR4 NA Koptk1 leukemia GSE104018 awaiting publication Download Download
Human Knockdown lnrCXCR4 NA CUTLL1 leukemia GSE104018 awaiting publication Download Download
Human Knockdown lnrCXCR4 NA HpbALL leukemia GSE104018 awaiting publication Download Download
Human Knockdown lnrCXCR4 NA Koptk1 leukemia GSE104018 awaiting publication Download Download
Human Knockdown lnrCXCR4 NA CUTLL1 leukemia GSE104018 awaiting publication Download Download
Human Knockdown LAST NA HCT116 Normal GSE106917 Cao L, Zhang P, Li J, Wu M. LAST, a c-Myc-inducible long noncoding RNA, cooperates with CNBP to promote CCND1 mRNA stability in human cells. Elife 2017 Dec 4;6. Download Download
Human Knockdown SBF2-AS1 lung A549 lung cancer GSE103016 awaiting publication Download Download
Human Knockdown RAD51-AS1 Ovary SKOV3.ip Epithelial ovarian cancer GSE89374 Zhang X, Liu G, Qiu J, Zhang N et al. E2F1-regulated long non-coding RNA RAD51-AS1 promotes cell cycle progression, inhibits apoptosis and predicts poor prognosis in epithelial ovarian cancer. Sci Rep 2017 Jun 30;7(1):4469.  Download Download
Human Knockdown lncRNA-LBCS bladder UM-UC-3 bladder cancer GSE79832 Chen X, Gu P, Xie R, Han J et al. Heterogeneous nuclear ribonucleoprotein K is associated with poor prognosis and regulates proliferation and apoptosis in bladder cancer. J Cell Mol Med 2017 Jul;21(7):1266-1279. Download Download
Human Knockdown CASC15 NA REH Acute lymphatic leukemia GSE101149 awaiting publication Download Download
Human Knockdown IGFL2-AS1 breast MCF-10AT1 breast cancer GSE98393 Tracy KM, Tye CE, Page NA, Fritz AJ et al. Selective expression of long non-coding RNAs in a breast cancer cell progression model. J Cell Physiol 2018 Feb;233(2):1291-1299. Download Download
Human Knockdown TYKRIL blood NA normal GSE84730 Bischoff FC, Werner A, John D, Boeckel JN et al. Identification and Functional Characterization of Hypoxia-Induced Endoplasmic Reticulum Stress Regulating lncRNA (HypERlnc) in Pericytes. Circ Res 2017 Aug 4;121(4):368-375. Download Download
Human Knockdown TYKRIL blood NA normal GSE84730 Bischoff FC, Werner A, John D, Boeckel JN et al. Identification and Functional Characterization of Hypoxia-Induced Endoplasmic Reticulum Stress Regulating lncRNA (HypERlnc) in Pericytes. Circ Res 2017 Aug 4;121(4):368-375. Download Download
Human Knockdown SLC25A25-AS1 NA HT29 Colorectal carcinoma GSE95605 awaiting publication Download Download
Human Knockdown SLC25A25-AS1 NA SW480 Colorectal carcinoma GSE95605 awaiting publication Download Download
Mouse Knockdown Linc-RAM myoblasts C2C12 normal GSE72601 Yu X, Zhang Y, Li T, Ma Z et al. Long non-coding RNA Linc-RAM enhances myogenic differentiation by interacting with MyoD. Nat Commun 2017 Jan 16;8:14016. Download Download
Mouse Overexpressed Linc-RAM myoblasts C2C12 normal GSE72601 Yu X, Zhang Y, Li T, Ma Z et al. Long non-coding RNA Linc-RAM enhances myogenic differentiation by interacting with MyoD. Nat Commun 2017 Jan 16;8:14016. Download Download
Mouse Knockdown Evx1as NA NA normal GSE62899 awaiting publication Download Download
Mouse Knockdown Evx1 NA NA normal GSE62899 awaiting publication Download Download
Mouse Knockdown Lhx1os NA NA normal GSE62899 awaiting publication Download Download
Mouse Knockdown Fendrr NA NA normal GSE62899 awaiting publication Download Download
Mouse Knockdown Pou3f3os NA NA normal GSE62899 awaiting publication Download Download
Mouse Knockdown Nr2f1as NA NA normal GSE62899 awaiting publication Download Download
Mouse Knockdown Sox21os NA NA normal GSE62899 awaiting publication Download Download
Human Knockdown NORAD NA U2OS normal GSE79804 Tichon A, Gil N, Lubelsky Y, Havkin Solomon T et al. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nat Commun 2016 Jul 13;7:12209. Download Download
Human Knockdown NORAD NA U2OS normal GSE79804 Tichon A, Gil N, Lubelsky Y, Havkin Solomon T et al. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nat Commun 2016 Jul 13;7:12209. Download Download
Human Overexpressed NORAD NA U2OS normal GSE79804 Tichon A, Gil N, Lubelsky Y, Havkin Solomon T et al. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nat Commun 2016 Jul 13;7:12209. Download Download
Human Knockdown NORAD NA U2OS normal GSE79804 Tichon A, Gil N, Lubelsky Y, Havkin Solomon T et al. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nat Commun 2016 Jul 13;7:12209. Download Download
Human Knockdown NORAD breast HeLa breast cancer GSE79804 Tichon A, Gil N, Lubelsky Y, Havkin Solomon T et al. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nat Commun 2016 Jul 13;7:12209. Download Download
Human Overexpressed NORAD breast HeLa breast cancer GSE79804 Tichon A, Gil N, Lubelsky Y, Havkin Solomon T et al. A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells. Nat Commun 2016 Jul 13;7:12209. Download Download
Human Knockdown CAT1 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT2 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT3 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT4 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT5 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT6 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT7 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT8 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT9 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT10 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT11 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT12 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT13 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT14 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT15 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT16 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown CAT17 breast HeLa F-17 breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown SCR breast H3 ES cells breast cancer GSE61549 Ray MK, Wiskow O, King MJ, Ismail N et al. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem 2016 Sep 9;291(37):19558-72. Download Download
Human Knockdown SLNCR1 skin WM1976 malignant melanoma GSE77902 Schmidt K, Joyce CE, Buquicchio F, Brown A et al. The lncRNA SLNCR1 Mediates Melanoma Invasion through a Conserved SRA1-like Region. Cell Rep 2016 May 31;15(9):2025-37. Download Download
Mouse Knockdown Evx1as  embryonic stem cells CJ9 normal GSE70419 Luo S, Lu JY, Liu L, Yin Y et al. Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells. Cell Stem Cell 2016 May 5;18(5):637-52. Download Download
Mouse Knockdown Evx1  embryonic stem cells CJ9 normal GSE70419 Luo S, Lu JY, Liu L, Yin Y et al. Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells. Cell Stem Cell 2016 May 5;18(5):637-52. Download Download
Human Knockdown GAS5 human embryonic stem cells H1 normal GSE66993 Xu C, Zhang Y, Wang Q, Xu Z et al. Long non-coding RNA GAS5 controls human embryonic stem cell self-renewal by maintaining NODAL signalling. Nat Commun 2016 Nov 4;7:13287. Download Download
Human Overexpressed GAS5 human embryonic stem cells H1 normal GSE66993 Xu C, Zhang Y, Wang Q, Xu Z et al. Long non-coding RNA GAS5 controls human embryonic stem cell self-renewal by maintaining NODAL signalling. Nat Commun 2016 Nov 4;7:13287. Download Download
Mouse Knockdown Malat1 Mammary tumor C57BL/6 mammary carcinoma GSE67647 Arun G, Diermeier S, Akerman M, Chang KC et al. Differentiation of mammary tumors and reduction in metastasis upon Malat1 lncRNA loss. Genes Dev 2016 Jan 1;30(1):34-51. Download Download
Mouse Knockdown Malat1 Mammary tumor C57BL/6 mammary carcinoma GSE67647 Arun G, Diermeier S, Akerman M, Chang KC et al. Differentiation of mammary tumors and reduction in metastasis upon Malat1 lncRNA loss. Genes Dev 2016 Jan 1;30(1):34-51. Download Download
Mouse Knockdown Malat1 Mammary tumor C57BL/6 mammary carcinoma GSE67647 Arun G, Diermeier S, Akerman M, Chang KC et al. Differentiation of mammary tumors and reduction in metastasis upon Malat1 lncRNA loss. Genes Dev 2016 Jan 1;30(1):34-51. Download Download
Mouse Knockdown H19 myotubes Mouse C3H myoblast normal GSE72941 Zhou J, Yang L, Zhong T, Mueller M et al. H19 lncRNA alters DNA methylation genome wide by regulating S-adenosylhomocysteine hydrolase. Nat Commun 2015 Dec 21;6:10221. Download Download
Mouse Knockdown lnc-OPC  cerebral cortex CD-1 normal GSE74647 awaiting publication Download Download
Human Knockdown lncRNA152 breast MCF-7 breast cancer GSE63189 Sun M, Gadad SS, Kim DS, Kraus WL. Discovery, Annotation, and Functional Analysis of Long Noncoding RNAs Controlling Cell-Cycle Gene Expression and Proliferation in Breast Cancer Cells. Mol Cell 2015 Aug 20;59(4):698-711. Download Download
Human Knockdown lncRNA152 breast MCF-7 breast cancer GSE63189 Sun M, Gadad SS, Kim DS, Kraus WL. Discovery, Annotation, and Functional Analysis of Long Noncoding RNAs Controlling Cell-Cycle Gene Expression and Proliferation in Breast Cancer Cells. Mol Cell 2015 Aug 20;59(4):698-711. Download Download
Human Knockdown lncRNA67  breast MCF-7 breast cancer GSE63189 Sun M, Gadad SS, Kim DS, Kraus WL. Discovery, Annotation, and Functional Analysis of Long Noncoding RNAs Controlling Cell-Cycle Gene Expression and Proliferation in Breast Cancer Cells. Mol Cell 2015 Aug 20;59(4):698-711. Download Download
Human Knockdown lncRNA67  breast MCF-7 breast cancer GSE63189 Sun M, Gadad SS, Kim DS, Kraus WL. Discovery, Annotation, and Functional Analysis of Long Noncoding RNAs Controlling Cell-Cycle Gene Expression and Proliferation in Breast Cancer Cells. Mol Cell 2015 Aug 20;59(4):698-711. Download Download
Human Knockdown PANCR Cardiomyocyte H9 normal GSE67844 Gore-Panter SR, Hsu J, Barnard J, Moravec CS et al. PANCR, the PITX2 Adjacent Noncoding RNA, Is Expressed in Human Left Atria and Regulates PITX2c Expression. Circ Arrhythm Electrophysiol 2016 Jan;9(1):e003197. Download Download
Mouse Knockdown PNKY null  C57/B6 normal GSE65542 Ramos AD, Andersen RE, Liu SJ, Nowakowski TJ et al. The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells. Cell Stem Cell 2015 Apr 2;16(4):439-447.  Download Download
Mouse Knockdown Firre Patski cells BL6/spretus normal GSE66172 Yang F, Deng X, Ma W, Berletch JB et al. The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation. Genome Biol 2015 Mar 12;16:52.  Download Download
Mouse Knockdown LncHSC-1 KSL cells C57BL/6 normal GSE53928 Luo M, Jeong M, Sun D, Park HJ et al. Long non-coding RNAs control hematopoietic stem cell function. Cell Stem Cell 2015 Apr 2;16(4):426-38. Download Download
Mouse Knockdown LncHSC-2 KSL cells C57BL/6 normal GSE53928 Luo M, Jeong M, Sun D, Park HJ et al. Long non-coding RNAs control hematopoietic stem cell function. Cell Stem Cell 2015 Apr 2;16(4):426-38. Download Download
Mouse Knockdown Esrp2-as mammary gland tumor M6 mammary gland tumor GSE96641 Heilmann K, Toth R, Bossmann C, Klimo K et al. Genome-wide screen for differentially methylated long noncoding RNAs identifies Esrp2 and lncRNA Esrp2-as regulated by enhancer DNA methylation with prognostic relevance for human breast cancer. Oncogene 2017 Nov 16;36(46):6446-6461.  Download Download
Mouse Overexpressed Esrp2-as mammary gland tumor M6 mammary gland tumor GSE96641 Heilmann K, Toth R, Bossmann C, Klimo K et al. Genome-wide screen for differentially methylated long noncoding RNAs identifies Esrp2 and lncRNA Esrp2-as regulated by enhancer DNA methylation with prognostic relevance for human breast cancer. Oncogene 2017 Nov 16;36(46):6446-6461.  Download Download
Mouse Overexpressed Esrp2-as mammary gland tumor M6 mammary gland tumor GSE96641 Heilmann K, Toth R, Bossmann C, Klimo K et al. Genome-wide screen for differentially methylated long noncoding RNAs identifies Esrp2 and lncRNA Esrp2-as regulated by enhancer DNA methylation with prognostic relevance for human breast cancer. Oncogene 2017 Nov 16;36(46):6446-6461.  Download Download
Human Knockdown DNM3OS ovarian cancer SKOV3 ovarian cancer GSE104295 Mitra R, Chen X, Greenawalt EJ, Maulik U et al. Decoding critical long non-coding RNA in ovarian cancer epithelial-to-mesenchymal transition. Nat Commun 2017 Nov 17;8(1):1604.  Download Download
Human Knockdown BLACAT2 bladder cancer cell UM-UC-3 bladder cancer GSE101287 awaiting publication Download Download
Human Knockdown MANCR breast MDA-MB-231 Triple negative breast cancer GSE102155 Tracy KM, Tye CE, Ghule PN, Malaby HLH et al. Mitotically-Associated lncRNA (MANCR) Affects Genomic Stability and Cell Division in Aggressive Breast Cancer. Mol Cancer Res 2018 Jan 29.  Download Download
Mouse Knockdown lncRNA_041249 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown Pvt1 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_097790 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_104449 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_096443 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_141992 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_166788 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_124982 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Mouse Knockdown lncRNA_177417 Primary bone marrow C57BL6 normal  GSE90059 Delás MJ, Sabin LR, Dolzhenko E, Knott SR et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife 2017 Sep 6;6. Download Download
Human Knockdown HIPSTR embryo HEK293 normal GSE77937 Yunusov D, Anderson L, DaSilva LF, Wysocka J et al. HIPSTR and thousands of lncRNAs are heterogeneously expressed in human embryos, primordial germ cells and stable cell lines. Sci Rep 2016 Sep 8;6:32753. Download Download
Human Knockdown HIPSTR embryo H1BP normal GSE77937 Yunusov D, Anderson L, DaSilva LF, Wysocka J et al. HIPSTR and thousands of lncRNAs are heterogeneously expressed in human embryos, primordial germ cells and stable cell lines. Sci Rep 2016 Sep 8;6:32753. Download Download
Human Overexpression SLNCR1 skin A375 malignant melanoma GSE77901 Schmidt K, Joyce CE, Buquicchio F, Brown A et al. The lncRNA SLNCR1 Mediates Melanoma Invasion through a Conserved SRA1-like Region. Cell Rep 2016 May 31;15(9):2025-37. Download Download
Human Knockdown DINO lung  FL2 normal GSE76420 awaiting publication Download Download
Human Knockdown DINO lung  FL3 normal GSE76417 awaiting publication Download Download
Human Knockdown FMR4 Human Embryonic Kidney HEK 293T cells intellectual disability and au GSE70817 awaiting publication Download Download
Mouse Knockdown Blnc1 brown adipocyte null normal GSE57540 Zhao XY, Li S, Wang GX, Yu Q et al. A long noncoding RNA transcriptional regulatory circuit drives thermogenic adipocyte differentiation. Mol Cell 2014 Aug 7;55(3):372-82.  Download Download
Human Knockdown SENCR coronary artery smooth muscle null null GSE51878 Bell RD, Long X, Lin M, Bergmann JH et al. Identification and initial functional characterization of a human vascular cell-enriched long noncoding RNA. Arterioscler Thromb Vasc Biol 2014 Jun;34(6):1249-59. Download Download
Mouse Knockdown LncRNA-smad7 skeletal muscle C57BL/6 skeletal muscle damage GSE106365 awaiting publication Download Download
Human Overexpression SNHG1 colon HCT116 Cancer GSE69888 awaiting publication Download Download
Human Overexpression SNHG1 colon HCT116 Cancer GSE69888 awaiting publication Download Download
Human Overexpression NRAV lung A549 normal GSE48874 Ouyang J, Zhu X, Chen Y, Wei H et al. NRAV, a long noncoding RNA, modulates antiviral responses through suppression of interferon-stimulated gene transcription. Cell Host Microbe 2014 Nov 12;16(5):616-26. Download Download
Human Knockdown LincIN breast MDA-MB-231-Luc-D3H1 breast GSE79214 awaiting publication Download Download
Human Knockdown RMEL3 human malignant melanoma cell A375-SM melanoma GSE72675 Goedert L, Pereira CG, Roszik J, Plaça JR et al. RMEL3, a novel BRAFV600E-associated long noncoding RNA, is required for MAPK and PI3K signaling in melanoma. Oncotarget 2016 Jun 14;7(24):36711-36718. Download Download
Human Knockdown linc00598 NA HEK293t  normal GSE80514 Jeong OS, Chae YC, Jung H, Park SC et al. Long noncoding RNA linc00598 regulates CCND2 transcription and modulates the G1 checkpoint. Sci Rep 2016 Aug 30;6:32172 Download Download
Human Knockdown NRCP NA SKOV3 normal GSE74447 awaiting publication Download Download
Human Knockdown BALR-2  B-cells RS4;11 B-acute lymphoblastic leukemia GSE65646 Fernando TR, Rodriguez-Malave NI, Waters EV, Yan W et al. LncRNA Expression Discriminates Karyotype and Predicts Survival in B-Lymphoblastic Leukemia. Mol Cancer Res 2015 May;13(5):839-51. Download Download
Mouse Knockdown Dali neuroblastoma cell line neuro 2A (N2A) normal GSE62035 Chalei V, Sansom SN, Kong L, Lee S et al. The long non-coding RNA Dali is an epigenetic regulator of neural differentiation. Elife 2014 Nov 21;3:e04530.  Download Download
Mouse Knockdown Dali neuroblastoma cell line neuro 2A (N2A) normal GSE62035 Chalei V, Sansom SN, Kong L, Lee S et al. The long non-coding RNA Dali is an epigenetic regulator of neural differentiation. Elife 2014 Nov 21;3:e04530.  Download Download